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CFC2 Bibliography of Publications and Abstracts

The Catalyst for a Cure Researchers
The Catalyst for a Cure Researchers

The Catalyst for a Cure Biomarker team of scientists has received important peer acknowledgment in key science publications.

The following list of Catalyst for a Cure (CFC 2) Publications and Abstracts represents research results published since 2012.

2012

M.B. Steketee, S.N. Moysidis, J.E. Weinstein, A. Kreymerman, J. Silva, S. Iqbal, J.L. Goldberg (2012). Mitochondrial dynamics regulate growth cone motility, guidance, and neurite growth rate in perinatal retinal ganglion cells in vitro. IOVS, 53(11):7402-11.

J.E. Weinstein, M.B. Steketee, J.L. Goldberg (2012). Developmental Distribution of Mitochondria in Retinal Ganglion Cell Axons. ARVO 3968/D832.

M. Steketee, J.E. Weinstein, A. Kreymerman, J.L. Goldberg (2012). Activity-dependent expression of nuclear encoded mitochondrial proteins in retinal ganglion cell axons in vivo. SFN 312.08.

A. Dubra and Y.N. Sulai, "First-order design of a reflective viewfinder for adaptive optics ophthalmoscopy," Opt. Express 20, 26596-26605 (2012).

2013

A. Kreymerman, M. Steketee, Y. Wang, J.L. Goldberg (2013). The role of mitochondrial fission/fusion in CNS axon regeneration. SFN San Diego, CA: 126.12/A26.

V.J. Srinivasan, H. Radhakrishnan, "Total average blood flow and angiography in the rat retina," J Biomed Opt. 18(7):076025, (2013).

H. Radhakrishnan, V.J. Srinivasan, "Multi-parametric OCT imaging of the inner retinal hemodynamic response to visual stimulation," J Biomed Opt. 18(8):086010, (2013).

A. Pinhas, M. Dubow, N. Shah, T.Y. Chui, D. Scoles, Y. Sulai, R. Weitz, J.B. Walsh, J. Carroll, A. Dubra, R. B. Rosen, “In vivo imaging of human retinal microvasculature using adaptive optics scanning light ophthalmoscope fluorescein angiography,” Biomed. Opt. Express 4, 1305-1317 (2013).

2014

O.S. Dhande, A.D. Huberman (2014) Retinal ganglion cell maps in the brain: implications for visual processing. Current Opinion in Neurobiology 24(1):133-42.

A. Kreymerman, Y. Wang, N.J. Kunzevitzky, M.B. Steketee, J.L. Goldberg (2014). The role of mitochondrial fission/fusion in CNS axon regeneration. SFN, Washington DC, 399.11/C14

A. Kreymerman, J.L. Goldberg (2014). Role of mitochondrial dynamics in axon growth. Joint Symposium of the 4th International Neural Regeneration Symposium, 6th International Spinal Cord Injury Treatments and Trials Symposium, and the 9th Asia Pacific Symposium on Neural Regeneration, Nanjing, China

S. P. Chong, C. Merkle, H. Radhakrishnan, C. Leahy, A. Dubra, Y. Sulai, and V. J. Srinivasan, Optical Coherence Imaging of Microvascular Oxygenation and Hemodynamics, in CLEO: 2014, OSA Technical Digest (online) (Optical Society of America, 2014)

Y.N. Sulai, D. Scoles, Z. Harvey and A. Dubra, "Visualization of retinal vascular structure and perfusion with a nonconfocal adaptive optics scanning light ophthalmoscope," J. Opt. Soc. Am. A 31, 569-579 (2014). PMID: 24690655

Y.N. Sulai and A. Dubra, "Non-common path aberration correction in an adaptive optics scanning ophthalmoscope," Biomed. Opt. Express 5, 3059-3073 (2014).

D.H. Scoles, B.P. Higgins, R.F. Cooper, A.M. Dubis, P. Summerfelt, D.V. Weinberg, J.E. Kim, K.E. Stepien, J. Carroll and A. Dubra, “Microscopic Inner Retinal Hyper-Reflective Phenotypes in Retinal and Neurologic Disease,” Invest. Ophthalmol. Vis. Sci.55 (7), 4015-29 (2014).

D.H. Scoles, Y.N. Sulai, C. Langlo, G.A. Fishman, C.A. Curcio, J. Carroll, and A. Dubra, “In vivo imaging of human cone photoreceptor inner segments,” Invest. Ophthalmol. Vis. Sci. 55 (7), 4244-4251(2014).

T.Y. P. Chui, M. Dubow, A. Pinhas, N. Shah, A. Gan, R. Weitz, Y.N. Sulai, A. Dubra and R.B. Rosen, "Comparison of adaptive optics scanning light ophthalmoscopic fluorescein angiography and offset pinhole imaging," Biomed. Opt. Express 5, 1173-1189 (2014).

M. Dubow, A. Pinhas, N. Shah, R. Cooper, A. Gan, R. Gentile, V. Hendrix, Y. Sulai, J. Carroll, T. Chui, J. Walsh, R. Rosen and A. Dubra, “Classification of Human Retinal Microaneurysms using Adaptive Optics Scanning Light Ophthalmoscope Fluorescein Angiography” Invest. Ophthalmol. Vis. Sci. 55:1299-1309, (2014).

A. Pinhas, M. Razeen, M. Dubow, A Gan, T.Y. Chui, N. Shah, M. Mehta, R.C. Gentile, R. Weitz, J. Walsh, Y.N. Sulai, J. Carroll, A. Dubra and R.B. Rosen, “Assessment of perfused foveal microvascular density and identification of nonperfused capillaries in healthy and vasculopathic eyes,” Invest. Ophthalmol. Vis. Sci., 55(12):8056-66 (2014).

2015

R. N. El-Danaf, and A.D. Huberman (2015) Characteristic patterns of dendritic remodeling in early-stage glaucoma: evidence from genetically identified retinal ganglion cell types. Journal of Neuroscience. 35 (6):2329-43.

C. Leahy, H. Radhakrishnan, G. Weiner, J.L. Goldberg, and V.J. Srinivasan (2015). Mapping the 3-D connectivity of the rat inner retinal vascular network using OCT angiography. IOVS, 56(10): 5785-93.

J.E. Weinstein, J.L. Goldberg, M. Steketee (2015). Developmental Distribution of Mitochondria in Retinal Ganglion Cell Axons. ARVO Annual Meeting, Denver, CO: 4953 - B0152
Y. Takihara, M. Inatani, K. Etoc, T. Inoue, A. Kreymerman, S. Miyake, S. Ueno, M. Nagaya, A. Nakanishi, K. Iwao, Y. Takamura, H. Sakamoto, K. Satoh, M. Kondo, T. Sakamoto, J.L. Goldberg, J. Nabekura, and H. Tanihara (2015). In vivo imaging of mitochondrial axonal transport in the diseased and aged mammalian CNS. PNAS, 112(33):10515-20. PMC4547257

A. Kreymerman, M.B. Steketee, J.L. Goldberg (2015). The role of mitochondrial dynamics in CNS axon regeneration. SFN Annual Meeting, Chicago, 568.21/A64
M.F. Chen, T.Y.P. Chui, P. Alhadeff, R.B. Rosen, R. Ritch, A. Dubra and D.C. Hood, “Adaptive optics imaging of healthy and abnormal regions of retinal nerve fiber bundles of patients with glaucoma, Invest. Ophthalmol. Vis. Sci., 56, 674-681 (2015).

S.P. Chong, C. Merkle, H. Radhakrishnan, C. Leahy, V.J. Srinivasan. “Quantitative mapping of microvascular chromophores using visible light spectroscopic Optical Coherence Tomography.” Biomedical Optics Express. 6(4), 1429-1450 (2015).

D.C. Hood, M.F. Chen, D. Lee, B. Epstein, P. Alhadeff, R.B. Rosen, R. Ritch, A. Dubra and T.Y. Chui, “Confocal adaptive optics imaging of peripapillary nerve fiber bundles: implications for glaucomatous damage seen on circumpapillary OCT scans,” Transl. Vis. Sci. Technol. 4(2) article 12 (2015).

D.C. Hood, B. Fortune, M.A. Mavrommatis, J. Reynaud, R. Ramachandran, R. Ritch, R.B. Rosen, H. Muhammad, A. Dubra, T.Y.P. Chui, “Details of Glaucomatous Damage Are Better Seen on OCT En Face Images Than on OCT Retinal Nerve Fiber Layer Thickness Maps,” Invest. Ophthalmol. Vis. Sci, 56(11), 6208-6216 (2015).

A. Pinhas, M. Dubow, N. Shah, E. Cheang, C.L. Liu, M. Razeen, A. Gan, R. Weitz, Y.N. Sulai, T.Y. Chui, A. Dubra and R.B. Rosen, “Fellow eye changes in patients with central retinal vein occlusion: assessment of perfused foveal microvascular density and identification of nonperfused capillaries," Retina 35(10), 2028-2036 (2015).

2016

J.L. Goldberg (2016). Optic nerve restoration: Bench to bedside. 2016 China - ARVO Networking Forum, ARVO Annual Meeting, Seattle, WA.

D. Buickians, A. Kreymerman, J.L. Goldberg (2016). Application of GRIN lens for in vivo fluorescence microscopy of retinal ganglion cells. UCSF/BioEngineering Institute of California, 17th Annual UC Systemwide Bioengineering Symposium.

J.L. Goldberg (2016). Biomarkers for Glaucoma and Pathways to Neuroprotection. Joint Conference, Neuroprotection in the Visual System, Hospital Gemelli, Rome, Keynote Speaker.

D. Buickians, A. Kreymerman, E. Huynh, Y. Gong, H. Chen, J.L. Goldberg (2016). Application of gradient index lens for In vivo fluorescent microscopy of retinal ganglion cells. Society for Neuroscience Annual Meeting, San Diego, CA: 560.13

A. Kreymerman, J. Weinstein, D. Buickians, T. Tran, N. Sun, L. Bazik, M. Steketee, J.L. Goldberg (2016). Mitochondrial dynamics in retinal ganglion cell development and regeneration. Society for Neuroscience Annual Meeting, San Diego, CA: 118.10

S.H. Shah, L.M. Schiapparelli, S. Saturday, D. McClatchy, Y. Ma, J. Yates, III, H. Cline, J.L. Goldberg (2016). Quantifying changes in protein synthesis and transport in optic neuropathies. Society for Neuroscience Annual Meeting, San Diego, CA: 210.09

L.M. Schiapparelli, S. Shah, D. McClatchy, H. He, J. Li, Y. Ma, S. Saturday, J.L. Goldberg, J. Yates, III, H. Cline (2016). Novel strategies for detection and identification of the axonal "transportome" and pre-synaptome" in the rodent visual system. Society for Neuroscience Annual Meeting, San Diego, CA: 210.22

Srinivasan, V. J., & Dubra, A. (2016). Noninvasive imaging of the photoreceptor mosaic response to light stimulation. Proceedings of the National Academy of Sciences, 113(46), 12902-12903.

Merkle, C. W., Leahy, C., & Srinivasan, V.J. (2016). Dynamic contrast optical coherence tomography images transit time and quantifies microvascular plasma volume and flow in the retina and choriocapillaris. Biomedical Optics Express, 7(10), 4289-4312.

Shieh, E., Lee, R., Que, C., Srinivasan, V., Guo, R., DeLuna, R., & Chen, T. C. (2016). Diagnostic Performance of a Novel Three-Dimensional Neuroretinal Rim Parameter for Glaucoma Using High-Density Volume Scans. American Journal of Ophthalmology, 169, 168-178.

Lim J-H, Nguyen PL, Lien BV, Wang C, Zukor K, He Z, Huberman AD (2016) Neural activity promotes long distance, target-specific regeneration of adult retinal axons. Nature Neuroscience, 19: 1073-84. [featured article]

N. Sredar, M.M. Razeen, Y.N. Sulai, B.S. Sajdak and A. Dubra (2016) “Non-confocal split-detection adaptive optics scanning light ophthalmoscope with small pupil for vascular imaging,” ARVO Annual Meeting, Seattle, WA, USA.

J. Tam, J. Liu, A. Dubra and R.N. Fariss (2016) “Visualization of retinal pigment epithelial cells using adaptive optics enhanced indocyanine green imaging,” ARVO Annual Meeting, Seattle, WA, USA.

D. Lee, T.Y. Chui, R. Jarukasetphon, R. B. Rosen, R. Ritch, A. Dubra and D.C. Hood (2016) “Local glaucoma progression detected by adaptive optics-scanning light ophthalmoscopy,” ARVO Annual Meeting, Seattle, WA, USA.

D. Scoles, J.A. Flatter, R.F. Cooper, C.S. Langlo, S. Robison, M. Neitz, D.V. Weinberg, M.E. Pennesi, D.P. Han, A. Dubra and J. Carroll (2016) “Assessing photoreceptor structure associated with ellipsoid zone disruptions visualized with optical coherence tomography,” ," Retina 36(1):91-103.

B. Sajdak, Y.N. Sulai, C.S. Langlo, G. Luna, S.K. Fisher, D.K. Merriman and A. Dubra (2016) “Noninvasive imaging of the thirteen-lined ground squirrel photoreceptor mosaic,” Vis Neurosci.33:E003.

T.Y.P. Chui, A. Pinhas, A. Gan, M. Razeen, N. Shah, E. Cheang, C.L. Liu, A. Dubra and R.B. Rosen (2016) “Longitudinal imaging of microvascular remodelling in proliferative diabetic retinopathy using adaptive optics scanning light ophthalmoscopy,” Ophthal. Physil. Opt. 36 (3), 290-302.

J. Liu , A. Dubra, R. Fariss and Johnny Tam (2016) “In vivo imaging of human retinal pigment epithelial mosaic using adaptive optics enhanced indocyanine green ophthalmoscopy,” Invest. Ophthalmol. Vis. Sci. 57(10):4376-4384.

2017

Chong, S. P., Bernucci, M., Radhakrishnan, H., & Srinivasan, V.J. (2017). Structural and functional human retinal imaging with a fiber-based visible light OCT ophthalmoscope. Biomedical Optics Express, 8(1), 323-337.

B. Laha, B.K. Stafford BK, A.D. Huberman “Regenerating optic pathways from the eye to the brain.” Science, 356: 1031-1034 (2017)

Zhu, J., Merkle, C.W., Bernucci, M.T., Chong, S.P., & Srinivasan, V.J. (2017) “Can OCT Angiography Be Made a Quantitative Blood Measurement Tool?,” Applied Sciences, 7(687).

B.T. Nguyen, J.L. Goldberg (2017). Retinal Ganglion Cell Regeneration Strategies for Vision Loss in Glaucoma. View on Glaucoma 12(1):18-21

L.M. Schiapparelli, S.H. Shah, Y. Ma, J. Yates III, H.T. Cline, J.L. Goldberg (2017). Quantifying protein synthesis and axonal transport in the visual system and its response after optic nerve injury. Society for Neuroscience Annual Meeting, Washington, D.C.: 684.10

L.M. Schiapparelli, S. Shah, D. McClatchy, H. He, J. Li, Y. Ma, S. Saturday, J.L. Goldberg, J. Yates, III, H. Cline (2016). Novel strategies for detection and identification of the axonal "transportome" and pre-synaptome" in the rodent visual system. Society for Neuroscience Annual Meeting, San Diego, CA: 210.22

Goldberg JL “Optic Nerve Regeneration, Bench to Bedside”. Hawaiian Eye, January 2017.

Goldberg JL “Update on Biomarkers for Glaucoma”. Glaucoma360 New Horizons, San Francisco, Feb 2017.

Goldberg JL “Optic Nerve Regeneration, Bench to Clinic”. MEEI Military Vision Conference, Mar 2017.

Goldberg JL “The Future of Glaucoma Diagnosis and Treatment” NY Glaucoma Society, June 2017.

Goldberg JL “Stem Cells and Biomarkers for Glaucoma”. Fox Center Regeneration Meeting, Washington, DC, July 2017.

Srinivasan, V.J., Chong, S.P. and Bernucci, M.T., 2017. Spectroscopic imaging of the outer retina with visible light OCT. Investigative Ophthalmology & Visual Science, 58(8), pp.5444-5444.

Bernucci, M.T., Merkle, C. and Srinivasan, V.J., 2017. Using a contrast agent to explain vascular scattering patterns in OCT angiography. Investigative Ophthalmology & Visual Science, 58(8), pp.5434-5434.

Chong, S.P., Bernucci, M.T., Borycki, D., Radhakrishnan, H. and Srinivasan, V.J., 2017, April. Structural and functional human retinal imaging with a fiber-based visible light OCT ophthalmoscope (Conference Presentation). In Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XXI (Vol. 10053, p. 100530H). International Society for Optics and Photonics.

A.E. Salmon, R.F. Cooper, C.S. Langlo, A. Baghaie, A. Dubra and J. Carroll, “An Automated Reference Frame Selection (ARFS) Algorithm for Cone Imaging with Adaptive Optics Scanning Light Ophthalmoscopy,” Translational Vision Science & Technology 6:9 doi:10.1167/tvst.6.2.9 (2017). PMCID: PMC5381332

D.C. Hood, D. Lee, R. Jarukasetphon, J. Nunez, M.A. Mavrommatis, R.B. Rosen, R. Ritch, A. Dubra, T.Y.P. Chui, “Progression of local glaucomatous damage near fixation as seen with adaptive optics imaging,” Translational Vision Science & Technology 6(4):6. doi: 10.1167/tvst.6.4.6. (2017). PMCID: PMC5508541

C. Bergeles, A. M. Dubis, B. Davidson, M. Kasilian, A. Kalitzeos, J. Carroll, A. Dubra, M. Michaelides, and S. Ourselin, "Unsupervised identification of cone photoreceptors in non-confocal adaptive optics scanning light ophthalmoscope images," Biomed. Opt. Express 8, 3081-3094 (2017). PMCID: PMC5480451

J. Liu, H.W. Jung, A. Dubra and J. Tam, “Automated Photoreceptor Cell Identification on Non-Confocal Adaptive Optics Images Using Multi-Scale Circular Voting,” Invest. Ophthalmol. Vis. Sci. 58(11):4477-4489. PMID: 28873173

D. Cunefare, L. Fang, R.F. Cooper, A. Dubra, J. Carroll and S. Farsiu, “Open source software for automatic detection of cone photoreceptors in adaptive optics ophthalmoscopy using convolutional neural networks,” Sci. Rep. 7, article # 6620 (2017).

T.A. Seabrook, O.S. Dhande, N. Ishiko, V.P. Wooley, P.L. Nguyen, A.D. Huberman, “Strict independence of parallel and poly-synaptic axon-target matching during visual reflex circuit assembly.” Cell Reports, 21: 3049- 3064. (2017)

2018

Merkle, C.W., Chong, S. P., Kho, A. M., Zhu, J., Dubra, A., & Srinivasan, V.J. (2018) “Visible light optical coherence microscopy of the brain with isotropic femtoliter resolution in vivo,” Optics Letters, 43(2).

Zhang, T., Chong, S. P., Kho, A. M., Dubra, A., & Srinivasan, V.J. (2018) “Ultrahigh resolution retinal imaging by visible light OCT with longitudinal achromatization”, Biomedical Optics Express, Vol. 9, Issue 4, pp. 1477-1491 (2018).

Bernucci, M.T., Merkle, C.W., & Srinivasan, V.J. (2018) “Investigation of artifacts in retinal and choroidal OCT angiography with a contrast agent,” Biomedical Optics Express, Vol. 9, Issue 3, pp. 1020-1040 (2018).

Last reviewed on July 17, 2018

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